Browse of TCMCG007C29518 protein

CDS

Accession Number	TCMCG007C29518
gbkey	CDS
Protein Id	XP_033148401.1
Location	join(787778..788159,788563..789238,789386..791289,791457..791778,792100..792334,792516..792680,792781..793053,793152..793397,793604..793951,794072..795427,795513..795569,795874..796284,796449..796672,796793..796926,797020..797089,797091..797191,797268..797446,797596..797688)
Gene	LOC103866455
GeneID	103866455
Organism	Brassica rapa

Protein

Length	2392aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_033292510.1
Definition	LOW QUALITY PROTEIN: uncharacterized protein LOC103866455 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Transducin family protein WD-40 repeat family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006873        [VIEW IN EMBL-EBI] GO:0006885        [VIEW IN EMBL-EBI] GO:0007035        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0019725        [VIEW IN EMBL-EBI] GO:0022607        [VIEW IN EMBL-EBI] GO:0030003        [VIEW IN EMBL-EBI] GO:0030004        [VIEW IN EMBL-EBI] GO:0030641        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034622        [VIEW IN EMBL-EBI] GO:0042592        [VIEW IN EMBL-EBI] GO:0043291        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045851        [VIEW IN EMBL-EBI] GO:0048878        [VIEW IN EMBL-EBI] GO:0050801        [VIEW IN EMBL-EBI] GO:0051452        [VIEW IN EMBL-EBI] GO:0051453        [VIEW IN EMBL-EBI] GO:0055067        [VIEW IN EMBL-EBI] GO:0055080        [VIEW IN EMBL-EBI] GO:0055082        [VIEW IN EMBL-EBI] GO:0065003        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0070070        [VIEW IN EMBL-EBI] GO:0070071        [VIEW IN EMBL-EBI] GO:0070072        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0098771        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCCGGAGACGAGTCAGGACCCGATCTCACTCACAGATCCGATCGATCAGTTACCTCTCCGGCTACTACGATCGGAGATCGTCCCGCCGGCTCCGTCTCGATCCAACTCTTCAATCGACTGGCTCCCCGACTTCGCCGGCTACTCATGGCTCGCTTACGGAGCTTCCTCTCTCCTCGTCGTCTCCCACCTCCCTTCCCCTCTCCGCGGCGAAGACTCTGCCAACGGACCGCTTTTCCGTCAGATTCTCGAGGTTTCCGGCGACGTTTCGTCTCCAGTTACCGCCGTTTCGTGGTCTCCTGTTACGCCGTCTGTAGGCGAGCTCGCGGTTGGGTCTGGGAGCTACGTTCGCCTCTTCGCGCGTGATCTTAGCGATCTGAACGGTTCTTTTTATTGGAGTCAGAGTGCTGTGTTGCTGCAAGAAACAAAAGTTGAAGCGATTGAGTGGACTGGATGCGGGGATGGGATGATAGTTGGTGGAACTGATATTGTTTTGTGGAAGAGAAAGAACCAATCCTGGGAAATAGCTTGGAAGTTCCCAGGGGATTACCTTCAAGATCTGGTTTCCTCCACCTGGTCAATCGAGGGTCCTTTTGCGTCGGCAGCTTCTTGGAGCAAGTTTCCGTCGGAGTGTGATGAGGCAGGTAGAGGTGTCTTGGCCTATTACAGTGACGGGGGGATATATCGTAAAGTTGAATTGCCTCATCCTCAGAGGATATCCACGATTCAGTGGAGACCGGTGGCTGCAGAGCAGTCTGTAGAATGCGCGGGGAAATCAGTGAGGAATGTGCTGATGACGTGTTGTTTGGATGGGGCTGTAAGGTTATGGTGTGAGGTAGATGGTGGAAAGAGTAAAAAAGGCATGAGAGATGGGCATAAAAAGTCTTTTTGCGTGGCAGCTGTGATAGAGATAAATCAGGTTTTGGATGGTTGTTTGGGGAGAGATTTATTTGTTTTTTGGGGAACTCGCTCAGGGGGTATATTGAAAACCATTGAAGGTGCTAATCAATTGTTTACTACGGAGAAGTATGATCATGAGAATGTTGGCAACTGCGAGTGGTTAGTAGGGCAAGGCCCTGGGAAATCTGCTTCTTTGTGGGCTGTCCATTGTCTTGATGACATCTCTCCTATGAGGTTTCCGAGGATTACATTGTGGGCGAGCCAAGAAACGAATGGAACTAGTCTGGAACCACTCTCTATAACTGATGCTACAGGTTTTTCTGATCGATTACCCCTTAAGAAAGTTTCTGTATTGAGAAACAACCTTTATGGCACGCCAGATATCTGCTCTTCCATTTATTTATCTTCACGCAATACCATATATTGGTCCTCCTTGCACACAGTAAAATCACATGCCTTAGAAGATTCACCTCCAGATAAATCCAGCGTATTGCAGTGCATCACGGAAAAAGTATTAGATCTTGATGGTCATGGTGGGAAAATCCTACAGGTTGCCTTTACTCCTATCATAAGTGAGGCGGGATACACTGCTTCTCTGGATTATAATGGTTTGATAATAATCTGGTCCTCTTGTGATTATTTGAACCGTGCTATTGACCATCCTATATCAGTTTCTTCCTGGAAACATTGTGGACGGCTTCAAAATCAAGAGTTAAGATTGAAGTACACGAGTATATGCTGGGCACCTTCATCATTGAATGATGAGAGCTTTCTACTTGCGGGACATGTACAAGGCATTGATTGTTATAGTGTGAGGAAAGGCGGGAGCGGTTATGGTGGTTTTCTTACCCATTACATATGTACCATACCGTTAGCAGTTAGCCAGCCTTTTGAGGATGGTCCGACCAGCATATTTGCAAGACCTCTTCCAGATTCTTGTGGAAAGACATTCAAAACTAACAGGTTTTTGCTTCTAAGTGTATGGATGAAAGATAAACGGTTTGATGCTCTGTCATGGAAAGTGACCCTGCATCATTTTGATGCAGCAGGAAGCACCTGCGACTGTCATTTTCATGATTTTGACAGCATGGAATCGGGCAAGTGGTTGTTCGAAGATACTTTTGCTGGTAAGAAAAATTGCATTGCTGTTAGATCATGCTCTTCAGAATTACCTGAATCTCATCGTTATGATGAAGTAACTAGTTTTGCTGTGGTCAATCCGAGCGGCAGGGCCCTAGAGAAGGACATGAACATTGAAAGTCAAGCTTATACTATGGCAACTGGTCATGATAATGGCTCTTTAAAACTGTGGAGAAGTAGCCTTCAGGAAAGTTCAACACCTTCCATTATGTGGGAGCTTGTTGGCATGCTTACCATTGGCAAAAGTCCTGTCAGTGCTATATCTCTAACTGAGTCGGGACACAAGATCGCAGCCCTCTGCACAGAGAATCATTCAAAAGCTGTTCGAACAATTAGCGTATGGGAGATTGTACACCTTCTCGATTCAGGGGTTTTCATACTAGAGGATAAGTTACATGTTGATGCAGAGGTTGTTGCTGTAAGATGGTCAACTGTGGGAAATGATCAGCTAATTCTTGGAGTTTGCACACAGAATGAGATGCGGGTATATGGTATTGCTCGGCAACCCTGCAGAAGTACCAGTTTCGCTGTCTCTGATTATTCTTCAGAGGCACAAATTTGGCAATGCTTCGCTGTTACTCGTACATTTTCTGCTATTCATGATTTATGGTGGGGATCCAAAGCCATGACTGCACTGGCTCATAATGATTATGTTAGCCTACATGGTCAATGGCTGGCCGTTACTGACAAGAAGCAAAAGACTGATAACAATCCAGAAATTTTTGCAGCCAATCTTCCGAAACTAGTGAATACTACAGAAGGCAGAGACTCTGAATTGTTATCTAATAGTATGCCTTTAACTGCGACCGCATATGGTTCAGATACTCTTAAGGACACGACAAGCATGTTGCATATTGTGGAAAAGTTAGGAGGCGCCTTGCCACTCTATCATCCTCATGCCCTCCTTGTCGCTATACGTTCAGGCAACTGGAAACGAGCAAGCGCAGCTTTAAGGCATCTTGCTGAGAATATTACTTCAGGTGATGCCTCCGTGAAGGATCACGGTGTAAAGTCAGATCTTTGTCAGGATATCCTTTTGTCAAAATATTATGAAGGGTCTGTCTCCAATGGCCCAAATCGTAAGGATTTCCATTGGGGTGGGACATCTGGTTCAATGCTACAGAATTCTCAGTTTCAGGCAGGGTTGCAGTCAAATTTCAGTATGGATTCTTATAGTCCCATGGTGTCACATGAAATTGGTAATCCACATTCGACTTCTGTCTATGCAAGTCTTGATGAAGCTGGGTGTAGATTTTGGATCACACTTAGGTTTAAGCAGCTGTACTTAGCTCGAAGTTCTGGCAAACCAGCATCTGTAGAAGAGTTGGATATTGACTCTAGTATGATAGGATGGGCTTTTCACTCAGAGTCTCAAGAAAATCTGTCTGGTTCTCTTTTACCCATTGAATCATCATGGCAACAAATGCGCTCACTGGGTTTTGGATTTTGGTGTTCAGATGTAGCACAGTTGCGCCCACGAATGGAGAAACTGGCCCGGCAGCAATACCTGAAGAACAAGAAACCTAAAGATTGTGCGCTTCTCTACATAGCTTTAAATAGAATTCAAGTTTTGGCTGGTCTTTTTAAAATAAGCAAGGATGAGAAAGATAAACCCTTGGTGGGTTTTCTTTCACGCAATTTTCAGGAAGAGAAAAATAAGGCAGCAGCCTTGAAAAATGCGTATGTGCTAATGGGTAAACACCAACTGGAGCTGGCTATAGGTTTCTTTCTCCTTGGAGGTGAAGCTTCATCGGCGATAAATGTCTGTGTGAAAAATCTTCAAGATGAGCAGCTTGCGCTCGTAATTTGCCGGCTTGTTGATGGGCAGGGTGGGGCACTGGAAAGTAATCTTATAAATAAATACATACTCCCATCTGCTGTTCGGAGAGGAGACTTTTGGCTGGCAAGCATACTTAAGTGGGAATTAGGAGAGTATCATCAGTCAATTCTTGCTATGGCTGGAAGTCTAGAGAACCCTGCTAATGGGAGCTCTACTGTTACTTCAAATCACATCTCTTTTGTGGATCCTAGTATTGGATTATACTGTCTCATGTTGACTACAAAAAATAGTCTGAAGAATGCAGTGGGGGAAAGAAATGCTTCAAACCTTAGTAGATGGGCAACCTTGATGACTGCTACCGCCTTCAGCAGATGTGGGCTTCCGCTCGAGGCGTTAGAATGTCTTTCAGCATCTGCCAGCGGTCATGGTGGTACGCATCAGGCTAGCGGTCAAAGTAATGGACATTTGGGTACTCCACGTGGTGTTCTTGAGCTTTCTGATCCTAATTCTAATTGGGTGTCAAGCGGTGTTTCATCTACTGTGGACACTCGTTTTAAACTGAGTCTAGCCGCCCATTCCCTCTCAAAGCTATTAAGGGAAGCAACTGCACTATTAAGGAGTTCTGAAATTGTTTTGTGTGAGAAACTCTCTGGATTTCAACATAAGCTACAAACATCTTTGGAGCTATTTTACCAGAGGTTTTCTTTATCTTCATCTTTCCTACGTAATACGATGAGTATGTCAGCATACAACAGTGGGTTACTACTATCCATGGGATACAATGTATTTCAGGAAAATAGTTCCTCAGGACGCTCACTAAATAAGTCCCAGACAAATGAAGATCTCCTCCAATATTCAGCTTTGTGTAAATTGATTCTAAAAGCGACCGAAGAGAACTCGTTTATATTGTCACGTATCATTGCTGCATGCAGTGTCACTTGCTTTCACTCAGTGCCATGCTTAGAGGAAAACAAGGTGTCATCTGGACCTGAGCCAAAGTTGTCTAATGCTTTACGATTTTACTTTCAGGGCATTCTGCAATCCTTCTCTAGTTTTGAAACTACTATAAGGCTGTGCTTGAACTCCTCTTTGGAAGACGTGAAAACAAGACTCGCCGTTGTTCTTGATTTAGTCGAATATTGCTCAAGACTCGCAATGGCTTGGATCCTAGGGGATGTAGACTGTCTCTTTCGAATGGTGCAGCCTTTGACGATATCATATTTTCATGGACATATGCCTTACGAGGTCGACCTGGAAAGCCTGAAGAGAGTGTACCACCAAGAAGTTTCTGTTAGTGTTCCAGATGCGTCAGATGCAGGACTTAATTCTATTGTTGAGAACAACGAAGTTGGATACCCAGTGAGCTCAATTCCAGGAGATGAAAGGCGTCTTGTAACACAAGCATGTTTCTGGAGGCATGTTTCGGACTTTGTGAAACATAAGATGGTATCGACTTCGATTGATCTAGATGATGGTATCTCGAATAGTGAATCCTCAGAGAAATTTGATGCTCAGACATCGTTCGATTCTAGTGGTGACATTGTATGTGTAACTGAGAAGATCATGTCCGTTCTGGGAAAAACACTGGTTAGCACCATAGCTCAACTGTCTTCCTACCATGTAAAACAACTTGTACTGTCCTTGAAACAGAAATTAGAGAAGAGAATTCAGGTTCCTACCTTGTTATGGTTGCACGGATGTCGGGAATCTCAGGCAAATTTTATTAATCGAGCTATCCCAGATTCAAGTACAGAGAATGAAGACAACAGCGACCTTGCAGTTTCTGTGAGGTTTTGGACACTTTGCGTTGATCCTCATTTAGTACTCGAAGCTTTCTTGCTAGAAAATTTTGACATATCTGAATGGTCAAAACTTAAACCATTGGAAGATTGGAGCAATATGTACAGAGAAATAAAGGGGAAGAATGAGCTCAATGTGCCATGCAATCAAGATGGTCTGAGTAGTAATGAAGTGGCTTCACTTGCAAACCACGCTTCTAATTCTTCGCAGAAAACTGCAACTGCCAGTGAAAATTCTGCTTTCCAGGACCCCAAAGAAATCCATAAGAGGACCGGGGAGCTTATACAGGCCATTTGTATCAATGCCATCAACCATCGGCAAGCTGCACTAGCTAGCAACCGCAAGGGTATAATTTTCTTTAACCAAGAAGATGGTGGTCCTTGCTATGATCAGTCAAACTATATTTGGTCAGATGCTGATTGGCCACGTAATGGTTGGGCTAACTCTGAGTCAACCCCTGTTCCAACATGTGTCTCACTCGGTGTTGGTCTTGGGGACAAAAAAGGAGCACACCTTGGGTTAGGTGGGGCCACTGTTGGTGATTTTTCTCTTTCCAAGCCATGGAAATCTCACAGGGTTCCGGCTTACACTGGGTTAGGAGTCTCTGGTCTAGGTTGGCAAACTCAAGAAGATTTTGAGCAGTTTATTGATCCTCCCCCAACAGTTGAAACTGTTATTGCAAGCGCATTCTCTAGTCACCCAACAATGCCTCTCTTCTTGGTTGGCTCAAGCAACACTCACATTTACTTGTGGGAGTTTGGAAAAGACAGAGCTACTGCAACTTACGGTGTCCTGCCTGCTGCAAATGTTCCTCCTCCATATGCTTTGGCGTCAATATCAGCAGTTCAATTCGGTCCATGCGGACACAGATTTGCTAGCGCTGCACTTGATGGAACGGTATGCACCTGGCAATCAGAAGTTGGAGGAAGAAGCAATGTCTATCCTGTTGAGTCATCTATTTGCTTCAATGGCTTTGCATCAGATGTGAAATATATTAGTTCGAGTGGATCTATAGTTGCAGCTTCAGGATATAGCTCAAGTGGTGCCAACGTAGTTGTATGGGATACTCTAGCTCCCCCTTCAACCTCCCAGGCATCTATCAGTTGTCATGAAGGTGGTGCACGCTCAATCTCGGTGTTTGATAATGACATTGGTAGTGGCTCGATTTCTCCAATGATTGTAACTGGCAAAAACAAGAAGCAGAGGAACGCTGACGGAAGATCTTCTACTGACGGAGATCAGAACAAGAATGGGATGCTTTGGTATATACCAAAGGCTCACTTAGGGAGTGTGACCAAGATATCGACAATACCACGGACAAGTCTGTTCTTGACAGGAAGCAAAGACGGAGATGTGAAACTTTGGGATGCAAAAGCAGCAAAGATGATTCATCACTGGCCTAAACTACACGAAAGGCACACTTTTCTGCAGCCAAACTCTAGAGGCTACGGTGGAATCATCCGAGCTGGGGTGACAGACATACAAGTTTGTCCGAATGGATTCATCACTTGTGGTGGTGATGGCACTGTGAAGTTCGTCAGCCTCAGAAATTCCTAA

Protein:   MPETSQDPISLTDPIDQLPLRLLRSEIVPPAPSRSNSSIDWLPDFAGYSWLAYGASSLLVVSHLPSPLRGEDSANGPLFRQILEVSGDVSSPVTAVSWSPVTPSVGELAVGSGSYVRLFARDLSDLNGSFYWSQSAVLLQETKVEAIEWTGCGDGMIVGGTDIVLWKRKNQSWEIAWKFPGDYLQDLVSSTWSIEGPFASAASWSKFPSECDEAGRGVLAYYSDGGIYRKVELPHPQRISTIQWRPVAAEQSVECAGKSVRNVLMTCCLDGAVRLWCEVDGGKSKKGMRDGHKKSFCVAAVIEINQVLDGCLGRDLFVFWGTRSGGILKTIEGANQLFTTEKYDHENVGNCEWLVGQGPGKSASLWAVHCLDDISPMRFPRITLWASQETNGTSLEPLSITDATGFSDRLPLKKVSVLRNNLYGTPDICSSIYLSSRNTIYWSSLHTVKSHALEDSPPDKSSVLQCITEKVLDLDGHGGKILQVAFTPIISEAGYTASLDYNGLIIIWSSCDYLNRAIDHPISVSSWKHCGRLQNQELRLKYTSICWAPSSLNDESFLLAGHVQGIDCYSVRKGGSGYGGFLTHYICTIPLAVSQPFEDGPTSIFARPLPDSCGKTFKTNRFLLLSVWMKDKRFDALSWKVTLHHFDAAGSTCDCHFHDFDSMESGKWLFEDTFAGKKNCIAVRSCSSELPESHRYDEVTSFAVVNPSGRALEKDMNIESQAYTMATGHDNGSLKLWRSSLQESSTPSIMWELVGMLTIGKSPVSAISLTESGHKIAALCTENHSKAVRTISVWEIVHLLDSGVFILEDKLHVDAEVVAVRWSTVGNDQLILGVCTQNEMRVYGIARQPCRSTSFAVSDYSSEAQIWQCFAVTRTFSAIHDLWWGSKAMTALAHNDYVSLHGQWLAVTDKKQKTDNNPEIFAANLPKLVNTTEGRDSELLSNSMPLTATAYGSDTLKDTTSMLHIVEKLGGALPLYHPHALLVAIRSGNWKRASAALRHLAENITSGDASVKDHGVKSDLCQDILLSKYYEGSVSNGPNRKDFHWGGTSGSMLQNSQFQAGLQSNFSMDSYSPMVSHEIGNPHSTSVYASLDEAGCRFWITLRFKQLYLARSSGKPASVEELDIDSSMIGWAFHSESQENLSGSLLPIESSWQQMRSLGFGFWCSDVAQLRPRMEKLARQQYLKNKKPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQEEKNKAAALKNAYVLMGKHQLELAIGFFLLGGEASSAINVCVKNLQDEQLALVICRLVDGQGGALESNLINKYILPSAVRRGDFWLASILKWELGEYHQSILAMAGSLENPANGSSTVTSNHISFVDPSIGLYCLMLTTKNSLKNAVGERNASNLSRWATLMTATAFSRCGLPLEALECLSASASGHGGTHQASGQSNGHLGTPRGVLELSDPNSNWVSSGVSSTVDTRFKLSLAAHSLSKLLREATALLRSSEIVLCEKLSGFQHKLQTSLELFYQRFSLSSSFLRNTMSMSAYNSGLLLSMGYNVFQENSSSGRSLNKSQTNEDLLQYSALCKLILKATEENSFILSRIIAACSVTCFHSVPCLEENKVSSGPEPKLSNALRFYFQGILQSFSSFETTIRLCLNSSLEDVKTRLAVVLDLVEYCSRLAMAWILGDVDCLFRMVQPLTISYFHGHMPYEVDLESLKRVYHQEVSVSVPDASDAGLNSIVENNEVGYPVSSIPGDERRLVTQACFWRHVSDFVKHKMVSTSIDLDDGISNSESSEKFDAQTSFDSSGDIVCVTEKIMSVLGKTLVSTIAQLSSYHVKQLVLSLKQKLEKRIQVPTLLWLHGCRESQANFINRAIPDSSTENEDNSDLAVSVRFWTLCVDPHLVLEAFLLENFDISEWSKLKPLEDWSNMYREIKGKNELNVPCNQDGLSSNEVASLANHASNSSQKTATASENSAFQDPKEIHKRTGELIQAICINAINHRQAALASNRKGIIFFNQEDGGPCYDQSNYIWSDADWPRNGWANSESTPVPTCVSLGVGLGDKKGAHLGLGGATVGDFSLSKPWKSHRVPAYTGLGVSGLGWQTQEDFEQFIDPPPTVETVIASAFSSHPTMPLFLVGSSNTHIYLWEFGKDRATATYGVLPAANVPPPYALASISAVQFGPCGHRFASAALDGTVCTWQSEVGGRSNVYPVESSICFNGFASDVKYISSSGSIVAASGYSSSGANVVVWDTLAPPSTSQASISCHEGGARSISVFDNDIGSGSISPMIVTXGKNKKQRNADGRSSTDGDQNKNGMLWYIPKAHLGSVTKISTIPRTSLFLTGSKDGDVKLWDAKAAKMIHHWPKLHERHTFLQPNSRGYGGIIRAGVTDIQVCPNGFITCGGDGTVKFVSLRNS